HL_7OG4_043

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CACAUG

Length

6 nucleotides

Bulged bases

7OG4|1|XA|A|2558

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OG4_043 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.1855

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

7OG4|1|XA|C|2555
7OG4|1|XA|A|2556
7OG4|1|XA|C|2557
7OG4|1|XA|A|2558
7OG4|1|XA|U|2559
7OG4|1|XA|G|2560

Current chains

Chain XA

16S mitochondrial rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain XD

39S ribosomal protein L2, mitochondrial