3D structure

PDB id
7OH3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GGUAAAGCGAAAACUUUAAAU
Length
21 nucleotides
Bulged bases
7OH3|1|1|A|1047
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OH3|1|1|G|993
7OH3|1|1|G|994
7OH3|1|1|U|995
7OH3|1|1|A|996
7OH3|1|1|A|997
7OH3|1|1|A|998
7OH3|1|1|G|999
7OH3|1|1|C|1000
7OH3|1|1|G|1001
7OH3|1|1|A|1002
7OH3|1|1|A|1003
7OH3|1|1|A|1047
7OH3|1|1|A|1048
7OH3|1|1|C|1049
7OH3|1|1|U|1050
7OH3|1|1|U|1051
7OH3|1|1|U|1052
7OH3|1|1|A|1053
7OH3|1|1|A|1054
7OH3|1|1|A|1055
7OH3|1|1|U|1056

Current chains

Chain 1
25S rRNA

Nearby chains

Chain 5
rRNA-processing protein CGR1
Chain F
60S ribosomal protein L7-A
Chain S
60S ribosomal protein L20-A
Chain T
60S ribosomal protein L21-A

Coloring options:

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