HL_7OH3_029
3D structure
- PDB id
- 7OH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUGUGAUG
- Length
- 8 nucleotides
- Bulged bases
- 7OH3|1|1|U|1353, 7OH3|1|1|G|1354, 7OH3|1|1|U|1356
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OH3_029 not in the Motif Atlas
- Geometric match to HL_4OOG_001
- Geometric discrepancy: 0.2991
- The information below is about HL_4OOG_001
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_56334.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 16
Unit IDs
7OH3|1|1|U|1347
7OH3|1|1|U|1348
7OH3|1|1|G|1349
7OH3|1|1|U|1353
7OH3|1|1|G|1354
7OH3|1|1|A|1355
7OH3|1|1|U|1356
7OH3|1|1|G|1357
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain E
- 60S ribosomal protein L6-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain e
- 60S ribosomal protein L32
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