HL_7OH3_054

3D structure

PDB id

7OH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

7OH3|1|1|C|2572

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OH3_054 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.1816

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.5

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

7OH3|1|1|C|2568
7OH3|1|1|U|2571
7OH3|1|1|C|2572
7OH3|1|1|G|2573

Current chains

Chain 1

25S rRNA

Nearby chains

Chain Z

60S ribosomal protein L27-A