HL_7OHP_015
3D structure
- PDB id
- 7OHP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCUUGAAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHP_015 not in the Motif Atlas
- Geometric match to HL_7KI3_001
- Geometric discrepancy: 0.2966
- The information below is about HL_7KI3_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 21
Unit IDs
7OHP|1|1|G|639
7OHP|1|1|U|640
7OHP|1|1|C|641
7OHP|1|1|U|642
7OHP|1|1|U|643
7OHP|1|1|G|644
7OHP|1|1|A|645
7OHP|1|1|A|646
7OHP|1|1|A|647
7OHP|1|1|C|648
7OHP|1|1|A|649
7OHP|1|1|C|650
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain e
- 60S ribosomal protein L32
Coloring options: