HL_7OHP_028

3D structure

PDB id

7OHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAGUAGCAGCGAAAC

Length

16 nucleotides

Bulged bases

7OHP|1|1|A|2352

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHP|1|1|G|1444
7OHP|1|1|U|1445
7OHP|1|1|A|1446
7OHP|1|1|G|1447
7OHP|1|1|U|1448
7OHP|1|1|A|1449
7OHP|1|1|G|1450
7OHP|1|1|C|1451
7OHP|1|1|A|2352
7OHP|1|1|G|2353
7OHP|1|1|C|2354
7OHP|1|1|G|2355
7OHP|1|1|A|2356
7OHP|1|1|A|2357
7OHP|1|1|A|2358
7OHP|1|1|C|2359

Current chains

Chain 1

25S rRNA

Nearby chains

Chain P

60S ribosomal protein L17-A