HL_7OHQ_060

3D structure

PDB id

7OHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCGUUCAUAGC

Length

11 nucleotides

Bulged bases

7OHQ|1|1|U|2842, 7OHQ|1|1|U|2843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHQ|1|1|G|2839
7OHQ|1|1|C|2840
7OHQ|1|1|G|2841
7OHQ|1|1|U|2842
7OHQ|1|1|U|2843
7OHQ|1|1|C|2844
7OHQ|1|1|A|2845
7OHQ|1|1|U|2846
7OHQ|1|1|A|2847
7OHQ|1|1|G|2848
7OHQ|1|1|C|2849

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 5

rRNA-processing protein CGR1

Chain S

60S ribosomal protein L20-A

Chain r

Ribosome biogenesis protein NSA2

Chain s

Nuclear GTP-binding protein NUG1