HL_7OHQ_078

3D structure

PDB id

7OHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUUGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OHQ_078 not in the Motif Atlas

Geometric match to HL_4LFB_004

Geometric discrepancy: 0.2873

The information below is about HL_4LFB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

7OHQ|1|6|C|37
7OHQ|1|6|U|38
7OHQ|1|6|U|39
7OHQ|1|6|U|40
7OHQ|1|6|G|41
7OHQ|1|6|G|42

Current chains

Chain 6

ITS2

Nearby chains

Chain K

Proteasome-interacting protein CIC1

Chain o

Ribosome biogenesis protein 15