HL_7OHV_024

3D structure

PDB id

7OHV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUGAUAUGAUG

Length

11 nucleotides

Bulged bases

7OHV|1|1|A|1352, 7OHV|1|1|U|1353, 7OHV|1|1|G|1354, 7OHV|1|1|U|1356

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHV|1|1|U|1347
7OHV|1|1|U|1348
7OHV|1|1|G|1349
7OHV|1|1|A|1350
7OHV|1|1|U|1351
7OHV|1|1|A|1352
7OHV|1|1|U|1353
7OHV|1|1|G|1354
7OHV|1|1|A|1355
7OHV|1|1|U|1356
7OHV|1|1|G|1357

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain E

60S ribosomal protein L6-A

Chain Q

60S ribosomal protein L18-A

Chain e

60S ribosomal protein L32