HL_7OI0_005

3D structure

PDB id

7OI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta rbfA pre-30S ribosomal subunit class D

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7OI0|1|A|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OI0_005 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.4502

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7OI0|1|A|C|207
7OI0|1|A|U|208
7OI0|1|A|U|209
7OI0|1|A|C|210
7OI0|1|A|G|211
7OI0|1|A|G|212

Current chains

Chain A

16S rRNA

Nearby chains