HL_7OI8_026
3D structure
- PDB id
- 7OI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUAACU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OI8_026 not in the Motif Atlas
- Geometric match to HL_5TBW_017
- Geometric discrepancy: 0.0996
- The information below is about HL_5TBW_017
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7OI8|1|A|A|1232
7OI8|1|A|U|1233
7OI8|1|A|A|1234
7OI8|1|A|A|1235
7OI8|1|A|C|1236
7OI8|1|A|U|1237
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
- Chain z
- Transfer RNA; tRNA
Coloring options: