HL_7OI8_028

3D structure

PDB id

7OI8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCACAA

Length

6 nucleotides

Bulged bases

7OI8|1|A|C|1487

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OI8_028 not in the Motif Atlas

Geometric match to HL_4WRT_001

Geometric discrepancy: 0.24

The information below is about HL_4WRT_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

7OI8|1|A|U|1484
7OI8|1|A|C|1485
7OI8|1|A|A|1486
7OI8|1|A|C|1487
7OI8|1|A|A|1488
7OI8|1|A|A|1489

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

39S ribosomal protein L3, mitochondrial

Chain L

39S ribosomal protein L14, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain Q

39S ribosomal protein L19, mitochondrial