HL_7OI8_029
3D structure
- PDB id
- 7OI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AAUGAUAUCAUCUCAACU
- Length
- 18 nucleotides
- Bulged bases
- 7OI8|1|A|U|1513, 7OI8|1|A|C|1517, 7OI8|1|A|C|1519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OI8_029 not in the Motif Atlas
- Geometric match to HL_7A0S_074
- Geometric discrepancy: 0.3278
- The information below is about HL_7A0S_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28904.1
- Basepair signature
- cWW-F-F-tWH-cWH-tSH-tHW-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7OI8|1|A|A|1506
7OI8|1|A|A|1507
7OI8|1|A|U|1508
7OI8|1|A|G|1509
7OI8|1|A|A|1510
7OI8|1|A|U|1511
7OI8|1|A|A|1512
7OI8|1|A|U|1513
7OI8|1|A|C|1514
7OI8|1|A|A|1515
7OI8|1|A|U|1516
7OI8|1|A|C|1517
7OI8|1|A|U|1518
7OI8|1|A|C|1519
7OI8|1|A|A|1520
7OI8|1|A|A|1521
7OI8|1|A|C|1522
7OI8|1|A|U|1523
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain k
- 39S ribosomal protein L53, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: