HL_7OIA_005

3D structure

PDB id

7OIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUCUGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIA_005 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1588

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

7OIA|1|A|U|177
7OIA|1|A|U|178
7OIA|1|A|C|179
7OIA|1|A|U|180
7OIA|1|A|G|181
7OIA|1|A|A|186

Current chains

Chain A

16S rRNA

Nearby chains

Chain M

39S ribosomal protein L15, mitochondrial

Chain S

39S ribosomal protein L21, mitochondrial