HL_7OIB_015
3D structure
- PDB id
- 7OIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UCACCCUA
- Length
- 8 nucleotides
- Bulged bases
- 7OIB|1|A|C|613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OIB_015 not in the Motif Atlas
- Geometric match to HL_5E6M_002
- Geometric discrepancy: 0.328
- The information below is about HL_5E6M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_10874.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7OIB|1|A|U|609
7OIB|1|A|C|610
7OIB|1|A|A|611
7OIB|1|A|C|612
7OIB|1|A|C|613
7OIB|1|A|C|614
7OIB|1|A|U|615
7OIB|1|A|A|616
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain b
- 39S ribosomal protein L43, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain h
- 39S ribosomal protein L50, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: