HL_7OIB_025
3D structure
- PDB id
- 7OIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUCACCAG
- Length
- 9 nucleotides
- Bulged bases
- 7OIB|1|A|U|1194, 7OIB|1|A|C|1195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OIB_025 not in the Motif Atlas
- Geometric match to HL_361D_002
- Geometric discrepancy: 0.3223
- The information below is about HL_361D_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7OIB|1|A|C|1192
7OIB|1|A|U|1193
7OIB|1|A|U|1194
7OIB|1|A|C|1195
7OIB|1|A|A|1196
7OIB|1|A|C|1197
7OIB|1|A|C|1198
7OIB|1|A|A|1199
7OIB|1|A|G|1200
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: