HL_7OID_027

3D structure

PDB id

7OID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAACAGUAACCU

Length

12 nucleotides

Bulged bases

7OID|1|A|G|1088, 7OID|1|A|U|1089, 7OID|1|A|A|1090

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OID|1|A|A|1083
7OID|1|A|A|1084
7OID|1|A|A|1085
7OID|1|A|C|1086
7OID|1|A|A|1087
7OID|1|A|G|1088
7OID|1|A|U|1089
7OID|1|A|A|1090
7OID|1|A|A|1122
7OID|1|A|C|1123
7OID|1|A|C|1124
7OID|1|A|U|1125

Current chains

Chain A

16S rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial

Chain X

39S ribosomal protein L28, mitochondrial