HL_7OID_039
3D structure
- PDB id
- 7OID (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAGAACAG
- Length
- 9 nucleotides
- Bulged bases
- 7OID|1|A|A|1547
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OID_039 not in the Motif Atlas
- Geometric match to HL_7RQB_068
- Geometric discrepancy: 0.1453
- The information below is about HL_7RQB_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.1
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7OID|1|A|C|1546
7OID|1|A|A|1547
7OID|1|A|A|1548
7OID|1|A|G|1549
7OID|1|A|A|1550
7OID|1|A|A|1551
7OID|1|A|C|1552
7OID|1|A|A|1553
7OID|1|A|G|1554
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: