HL_7OIE_029

3D structure

PDB id

7OIE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCAGAACCCAACC

Length

13 nucleotides

Bulged bases

7OIE|1|A|G|1161, 7OIE|1|A|A|1162, 7OIE|1|A|C|1169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OIE|1|A|G|1158
7OIE|1|A|C|1159
7OIE|1|A|A|1160
7OIE|1|A|G|1161
7OIE|1|A|A|1162
7OIE|1|A|A|1163
7OIE|1|A|C|1164
7OIE|1|A|C|1165
7OIE|1|A|C|1166
7OIE|1|A|A|1167
7OIE|1|A|A|1168
7OIE|1|A|C|1169
7OIE|1|A|C|1170

Current chains

Chain A

16S rRNA

Nearby chains

Chain 6

39S ribosomal protein L38, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial

Chain W

39S ribosomal protein L27, mitochondrial

Chain Z

39S ribosomal protein L30, mitochondrial

Chain f

39S ribosomal protein L48, mitochondrial