HL_7OIF_081

3D structure

PDB id

7OIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7OIF|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIF_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1515

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7OIF|1|2|G|462
7OIF|1|2|U|463
7OIF|1|2|U|464
7OIF|1|2|A|465
7OIF|1|2|A|466
7OIF|1|2|U|467
7OIF|1|2|A|468
7OIF|1|2|C|469
7OIF|1|2|C|470

Current chains

Chain 2

16S rRNA

Nearby chains