HL_7OIF_104
3D structure
- PDB id
- 7OIF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CspA-27 cotranslational folding intermediate 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCCUGGAAAGU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OIF_104 not in the Motif Atlas
- Homologous match to HL_2AKE_002
- Geometric discrepancy: 0.3272
- The information below is about HL_2AKE_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_83632.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7OIF|1|z|G|31
7OIF|1|z|C|32
7OIF|1|z|C|33
7OIF|1|z|U|34
7OIF|1|z|G|35
7OIF|1|z|G|36
7OIF|1|z|A|37
7OIF|1|z|A|38
7OIF|1|z|A|39
7OIF|1|z|G|40
7OIF|1|z|U|41
Current chains
- Chain z
- tRNA-Ser
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain m
- 30S ribosomal protein S9
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