3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGGCGAG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OIG_008 not in the Motif Atlas
Homologous match to HL_5J7L_141
Geometric discrepancy: 0.0952
The information below is about HL_5J7L_141
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_37369.2
Basepair signature
cWW-tSH-F-F-F
Number of instances in this motif group
9

Unit IDs

7OIG|1|1|C|246
7OIG|1|1|G|247
7OIG|1|1|G|248
7OIG|1|1|C|249
7OIG|1|1|G|250
7OIG|1|1|A|251
7OIG|1|1|G|252

Current chains

Chain 1
23S rRNA

Nearby chains

Chain K
50S ribosomal protein L15
Chain W
50S ribosomal protein L28
Chain d
50S ribosomal protein L35

Coloring options:


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