HL_7OIG_035

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7OIG|1|1|U|1396, 7OIG|1|1|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_035 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.0869

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OIG|1|1|G|1389
7OIG|1|1|U|1390
7OIG|1|1|U|1391
7OIG|1|1|A|1392
7OIG|1|1|A|1393
7OIG|1|1|U|1394
7OIG|1|1|A|1395
7OIG|1|1|U|1396
7OIG|1|1|U|1397
7OIG|1|1|C|1398

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L23