HL_7OIG_047

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

7OIG|1|1|C|1870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_047 not in the Motif Atlas

Geometric match to HL_6CZR_078

Geometric discrepancy: 0.2261

The information below is about HL_6CZR_078

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7OIG|1|1|C|1868
7OIG|1|1|G|1869
7OIG|1|1|C|1870
7OIG|1|1|A|1871
7OIG|1|1|A|1872
7OIG|1|1|G|1873

Current chains

Chain 1

23S rRNA

Nearby chains