HL_7OIG_060

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_060 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.155

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7OIG|1|1|A|2471
7OIG|1|1|G|2472
7OIG|1|1|U|2473
7OIG|1|1|U|2474
7OIG|1|1|C|2475
7OIG|1|1|A|2476
7OIG|1|1|U|2477
7OIG|1|1|A|2478
7OIG|1|1|U|2479

Current chains

Chain 1

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L6

Chain e

50S ribosomal protein L36