HL_7OIG_081

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7OIG|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1502

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7OIG|1|2|G|462
7OIG|1|2|U|463
7OIG|1|2|U|464
7OIG|1|2|A|465
7OIG|1|2|A|466
7OIG|1|2|U|467
7OIG|1|2|A|468
7OIG|1|2|C|469
7OIG|1|2|C|470

Current chains

Chain 2

16S rRNA

Nearby chains