HL_7OII_105
3D structure
- PDB id
- 7OII (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CspA-70 cotranslational folding intermediate 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUUUAGG(5MU)(5MU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OII_105 not in the Motif Atlas
- Homologous match to HL_6PMO_004
- Geometric discrepancy: 0.4059
- The information below is about HL_6PMO_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OII|1|z|G|31
7OII|1|z|A|32
7OII|1|z|U|33
7OII|1|z|U|34
7OII|1|z|U|35
7OII|1|z|A|36
7OII|1|z|G|37
7OII|1|z|G|38
7OII|1|z|5MU|39
7OII|1|z|5MU|40
7OII|1|z|C|41
Current chains
- Chain z
- tRNA-Leu
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain m
- 30S ribosomal protein S9
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