HL_7OIZ_025

3D structure

PDB id

7OIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

7OIZ|1|A|C|1136, 7OIZ|1|A|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIZ_025 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2435

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OIZ|1|A|G|1134
7OIZ|1|A|U|1135
7OIZ|1|A|C|1136
7OIZ|1|A|C|1137
7OIZ|1|A|G|1138
7OIZ|1|A|G|1139
7OIZ|1|A|C|1140

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9