HL_7OIZ_059

3D structure

PDB id

7OIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIZ_059 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.5517

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

7OIZ|1|a|C|885
7OIZ|1|a|A|886
7OIZ|1|a|U|887
7OIZ|1|a|C|888
7OIZ|1|a|C|889
7OIZ|1|a|C|890
7OIZ|1|a|G|891

Current chains

Chain a

23S rRNA

Nearby chains

Chain M

30S ribosomal protein S13