HL_7OJ0_009

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7OJ0|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OJ0_009 not in the Motif Atlas

Homologous match to HL_5J7L_009

Geometric discrepancy: 0.1683

The information below is about HL_5J7L_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7OJ0|1|A|C|342
7OJ0|1|A|U|343
7OJ0|1|A|A|344
7OJ0|1|A|C|345
7OJ0|1|A|G|346
7OJ0|1|A|G|347

Current chains

Chain A

16S rRNA

Nearby chains

Chain j

50S ribosomal protein L14

Chain o

50S ribosomal protein L19