HL_7OJ0_032
3D structure
- PDB id
- 7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAGCGGUAG
- Length
- 9 nucleotides
- Bulged bases
- 7OJ0|1|V|C|16, 7OJ0|1|V|G|18, 7OJ0|1|V|G|19, 7OJ0|1|V|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OJ0_032 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.149
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OJ0|1|V|C|13
7OJ0|1|V|A|14
7OJ0|1|V|G|15
7OJ0|1|V|C|16
7OJ0|1|V|G|18
7OJ0|1|V|G|19
7OJ0|1|V|U|20
7OJ0|1|V|A|21
7OJ0|1|V|G|22
Current chains
- Chain V
- tRNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
Coloring options: