HL_7OJ0_059

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OJ0_059 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.5422

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

7OJ0|1|a|C|885
7OJ0|1|a|A|886
7OJ0|1|a|U|887
7OJ0|1|a|C|888
7OJ0|1|a|C|889
7OJ0|1|a|C|890
7OJ0|1|a|G|891

Current chains

Chain a

23S rRNA

Nearby chains

Chain M

30S ribosomal protein S13