HL_7OJ0_099

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

7OJ0|1|a|U|2797, 7OJ0|1|a|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OJ0_099 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.2065

The information below is about HL_5J7L_200

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7OJ0|1|a|C|2795
7OJ0|1|a|U|2796
7OJ0|1|a|U|2797
7OJ0|1|a|U|2798
7OJ0|1|a|A|2799
7OJ0|1|a|A|2800
7OJ0|1|a|G|2801

Current chains

Chain a

23S rRNA

Nearby chains