HL_7OLC_071

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7OLC|1|1|U|3292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OLC_071 not in the Motif Atlas

Homologous match to HL_8C3A_072

Geometric discrepancy: 0.1693

The information below is about HL_8C3A_072

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7OLC|1|1|C|3291
7OLC|1|1|U|3292
7OLC|1|1|U|3293
7OLC|1|1|G|3294

Current chains

Chain 1

26S rRNA

Nearby chains

Chain SI

40S ribosomal protein S8