HL_7OLC_104
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7OLC|1|2|G|1597
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLC_104 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.2517
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7OLC|1|2|G|1590
7OLC|1|2|U|1591
7OLC|1|2|C|1592
7OLC|1|2|A|1593
7OLC|1|2|U|1594
7OLC|1|2|C|1595
7OLC|1|2|A|1596
7OLC|1|2|G|1597
7OLC|1|2|C|1598
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SQ
- 40S ribosomal protein S16-like protein
- Chain ST
- 40S ribosomal protein S19-like protein
- Chain SU
- 40S ribosomal protein S20-like protein
- Chain Sd
- uS14
Coloring options: