3D structure

PDB id
7OLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermophilic eukaryotic 80S ribosome at idle POST state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGAGGUAAAUUUCUUC
Length
16 nucleotides
Bulged bases
7OLC|1|1|G|297, 7OLC|1|1|U|298
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OLC|1|1|G|293
7OLC|1|1|G|294
7OLC|1|1|A|295
7OLC|1|1|G|296
7OLC|1|1|G|297
7OLC|1|1|U|298
7OLC|1|1|A|299
7OLC|1|1|A|300
7OLC|1|1|A|301
7OLC|1|1|U|302
7OLC|1|1|U|303
7OLC|1|1|U|304
7OLC|1|1|C|305
7OLC|1|1|U|306
7OLC|1|1|U|307
7OLC|1|1|C|308

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LL
60S ribosomal protein L13
Chain LN
Ribosomal protein L15
Chain La
60S ribosomal protein L28-like protein
Chain Li
60S ribosomal protein L36
Chain Lo
60S ribosomal protein L44-like protein

Coloring options:

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