HL_7OLC_125

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUACAAUUUAAAUCCCUUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|2|G|513
7OLC|1|2|U|514
7OLC|1|2|A|515
7OLC|1|2|C|516
7OLC|1|2|A|517
7OLC|1|2|A|518
7OLC|1|2|U|519
7OLC|1|2|U|520
7OLC|1|2|U|521
7OLC|1|2|A|522
7OLC|1|2|A|523
7OLC|1|2|A|524
7OLC|1|2|U|525
7OLC|1|2|C|526
7OLC|1|2|C|527
7OLC|1|2|C|528
7OLC|1|2|U|529
7OLC|1|2|U|530
7OLC|1|2|A|531
7OLC|1|2|A|532
7OLC|1|2|C|533

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein s9-like protein

Chain SY

40S ribosomal protein S24