HL_7OLD_058

3D structure

PDB id

7OLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUCAGUGUGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLD|1|1|U|2682
7OLD|1|1|U|2683
7OLD|1|1|U|2684
7OLD|1|1|C|2685
7OLD|1|1|A|2686
7OLD|1|1|G|2687
7OLD|1|1|U|2688
7OLD|1|1|G|2689
7OLD|1|1|U|2690
7OLD|1|1|G|2691
7OLD|1|1|A|2692

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LQ

Ribosomal protein L18-like protein

Chain LT

60S ribosomal protein l21-like protein

Chain La

60S ribosomal protein L28-like protein

Chain Lo

60S ribosomal protein L44-like protein