HL_7OPE_006

3D structure

PDB id

7OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7OPE|1|A|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OPE_006 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.0585

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7OPE|1|A|G|122
7OPE|1|A|G|123
7OPE|1|A|A|124
7OPE|1|A|A|125
7OPE|1|A|A|126
7OPE|1|A|C|127

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L23

Chain h

50S ribosomal protein L34