HL_7OPE_022
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGAAGAU
- Length
- 7 nucleotides
- Bulged bases
- 7OPE|1|A|A|659
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OPE_022 not in the Motif Atlas
- Geometric match to HL_5J7L_026
- Geometric discrepancy: 0.2334
- The information below is about HL_5J7L_026
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_93535.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7OPE|1|A|A|656
7OPE|1|A|G|657
7OPE|1|A|A|658
7OPE|1|A|A|659
7OPE|1|A|G|660
7OPE|1|A|A|661
7OPE|1|A|U|662
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L4
Coloring options: