HL_7OPE_026
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGUUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 7OPE|1|A|U|794, 7OPE|1|A|A|798, 7OPE|1|A|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OPE_026 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.1204
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7OPE|1|A|C|791
7OPE|1|A|G|792
7OPE|1|A|U|793
7OPE|1|A|U|794
7OPE|1|A|G|795
7OPE|1|A|A|796
7OPE|1|A|A|797
7OPE|1|A|A|798
7OPE|1|A|A|799
7OPE|1|A|G|800
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L3
- Chain W
- 50S ribosomal protein L22
- Chain f
- 50S ribosomal protein L32
- Chain h
- 50S ribosomal protein L34
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