HL_7OPE_056

3D structure

PDB id

7OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGUUGGAAAUCA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OPE|1|A|U|2331
7OPE|1|A|G|2332
7OPE|1|A|G|2333
7OPE|1|A|U|2334
7OPE|1|A|U|2335
7OPE|1|A|G|2336
7OPE|1|A|G|2337
7OPE|1|A|A|2338
7OPE|1|A|A|2339
7OPE|1|A|A|2340
7OPE|1|A|U|2341
7OPE|1|A|C|2342
7OPE|1|A|A|2343

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain H

50S ribosomal protein L5

Chain S

50S ribosomal protein L18