HL_7OPE_073
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUCCCAUACCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 7OPE|1|B|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OPE_073 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.1679
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.3
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7OPE|1|B|U|32
7OPE|1|B|U|33
7OPE|1|B|C|34
7OPE|1|B|C|35
7OPE|1|B|C|36
7OPE|1|B|A|37
7OPE|1|B|U|38
7OPE|1|B|A|39
7OPE|1|B|C|40
7OPE|1|B|C|41
7OPE|1|B|G|42
7OPE|1|B|A|43
7OPE|1|B|A|44
7OPE|1|B|C|45
7OPE|1|B|A|46
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain H
- 50S ribosomal protein L5
- Chain S
- 50S ribosomal protein L18
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