HL_7OT5_004

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

7OT5|1|1|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OT5_004 not in the Motif Atlas

Geometric match to HL_1UN6_003

Geometric discrepancy: 0.1827

The information below is about HL_1UN6_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

7OT5|1|1|U|137
7OT5|1|1|U|138
7OT5|1|1|U|139
7OT5|1|1|C|140
7OT5|1|1|G|141
7OT5|1|1|A|142

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L23