HL_7OT5_006

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7OT5|1|1|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OT5_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.0885

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7OT5|1|1|G|194
7OT5|1|1|A|195
7OT5|1|1|A|196
7OT5|1|1|A|197
7OT5|1|1|C|198
7OT5|1|1|A|199
7OT5|1|1|U|200
7OT5|1|1|C|201

Current chains

Chain 1

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L15

Chain W

50S ribosomal protein L28