HL_7OT5_018

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

7OT5|1|1|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OT5_018 not in the Motif Atlas

Homologous match to HL_5J7L_151

Geometric discrepancy: 0.1094

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

7OT5|1|1|C|611
7OT5|1|1|G|612
7OT5|1|1|A|613
7OT5|1|1|A|614
7OT5|1|1|U|615
7OT5|1|1|A|616
7OT5|1|1|G|617

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4