3D structure

PDB id
7P2E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UAAAUCAACAAA
Length
12 nucleotides
Bulged bases
7P2E|1|A|A|1118, 7P2E|1|A|A|1125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7P2E|1|A|U|1115
7P2E|1|A|A|1116
7P2E|1|A|A|1117
7P2E|1|A|A|1118
7P2E|1|A|U|1119
7P2E|1|A|C|1120
7P2E|1|A|A|1121
7P2E|1|A|A|1122
7P2E|1|A|C|1123
7P2E|1|A|A|1124
7P2E|1|A|A|1125
7P2E|1|A|A|1126

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 2
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
Chain B
28S ribosomal protein S2, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain E
28S ribosomal protein S6, mitochondrial
Chain S
28S ribosomal protein S23, mitochondrial

Coloring options:

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