HL_7P2E_018
3D structure
- PDB id
- 7P2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AUGAAACUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P2E_018 not in the Motif Atlas
- Geometric match to HL_3F2X_001
- Geometric discrepancy: 0.1373
- The information below is about HL_3F2X_001
- Detailed Annotation
- T-loop with 2 bulged bases not stacked
- Broad Annotation
- T-loop
- Motif group
- HL_13999.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
7P2E|1|A|A|1399
7P2E|1|A|U|1400
7P2E|1|A|G|1401
7P2E|1|A|A|1402
7P2E|1|A|A|1403
7P2E|1|A|A|1404
7P2E|1|A|C|1405
7P2E|1|A|U|1406
7P2E|1|A|U|1407
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain Z
- 28S ribosomal protein S33, mitochondrial
Coloring options: