HL_7P2E_020

3D structure

PDB id

7P2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAACUAA

Length

7 nucleotides

Bulged bases

7P2E|1|A|C|1525, 7P2E|1|A|U|1526

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P2E_020 not in the Motif Atlas

Geometric match to HL_5M3H_001

Geometric discrepancy: 0.2426

The information below is about HL_5M3H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7P2E|1|A|U|1522
7P2E|1|A|A|1523
7P2E|1|A|A|1524
7P2E|1|A|C|1525
7P2E|1|A|U|1526
7P2E|1|A|A|1527
7P2E|1|A|A|1528

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain V

28S ribosomal protein S27, mitochondrial