HL_7P48_014

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAAG

Length

5 nucleotides

Bulged bases

7P48|1|A|A|364, 7P48|1|A|A|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P48_014 not in the Motif Atlas

Homologous match to HL_4WF9_011

Geometric discrepancy: 0.0845

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7P48|1|A|C|362
7P48|1|A|A|363
7P48|1|A|A|364
7P48|1|A|A|365
7P48|1|A|G|366

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4